Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.12■□□□□ 0.33
Uba3Q8C878 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Uba3Q8C878 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Uba3Q8C878 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.11■□□□□ 0.33
Uba3Q8C878 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Uba3Q8C878 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Uba3Q8C878 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.11■□□□□ 0.33
Uba3Q8C878 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.11■□□□□ 0.33
Uba3Q8C878 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.11■□□□□ 0.33
Uba3Q8C878 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Uba3Q8C878 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Uba3Q8C878 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Uba3Q8C878 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.11■□□□□ 0.33
Uba3Q8C878 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Uba3Q8C878 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Uba3Q8C878 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.1■□□□□ 0.33
Uba3Q8C878 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Uba3Q8C878 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Uba3Q8C878 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.1■□□□□ 0.33
Uba3Q8C878 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Uba3Q8C878 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.1■□□□□ 0.33
Uba3Q8C878 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Uba3Q8C878 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Uba3Q8C878 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Uba3Q8C878 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.09■□□□□ 0.33
Uba3Q8C878 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.09■□□□□ 0.33
Uba3Q8C878 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.09■□□□□ 0.33
Uba3Q8C878 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.09■□□□□ 0.33
Uba3Q8C878 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Uba3Q8C878 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Uba3Q8C878 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.09■□□□□ 0.33
Uba3Q8C878 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Uba3Q8C878 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Uba3Q8C878 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Uba3Q8C878 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Uba3Q8C878 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Uba3Q8C878 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Uba3Q8C878 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Uba3Q8C878 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms