Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Ska3Q8C263 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Ska3Q8C263 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Gm33142-201ENSMUST00000193913 867 ntBASIC15.29■□□□□ 0.04
Ska3Q8C263 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.29■□□□□ 0.04
Ska3Q8C263 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ska3Q8C263 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ska3Q8C263 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Ska3Q8C263 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ska3Q8C263 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ska3Q8C263 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.27■□□□□ 0.04
Ska3Q8C263 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.27■□□□□ 0.04
Ska3Q8C263 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.27■□□□□ 0.04
Ska3Q8C263 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ska3Q8C263 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ska3Q8C263 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ska3Q8C263 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ska3Q8C263 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ska3Q8C263 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ska3Q8C263 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ska3Q8C263 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ska3Q8C263 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.27■□□□□ 0.04
Ska3Q8C263 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ska3Q8C263 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.27■□□□□ 0.04
Ska3Q8C263 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ska3Q8C263 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ska3Q8C263 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ska3Q8C263 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ska3Q8C263 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ska3Q8C263 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Ska3Q8C263 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ska3Q8C263 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ska3Q8C263 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ska3Q8C263 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Ska3Q8C263 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ska3Q8C263 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ska3Q8C263 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ska3Q8C263 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ska3Q8C263 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.26■□□□□ 0.03
Ska3Q8C263 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.26■□□□□ 0.03
Ska3Q8C263 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ska3Q8C263 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.26■□□□□ 0.03
Ska3Q8C263 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.26■□□□□ 0.03
Ska3Q8C263 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.26■□□□□ 0.03
Ska3Q8C263 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ska3Q8C263 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.26■□□□□ 0.03
Ska3Q8C263 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ska3Q8C263 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ska3Q8C263 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ska3Q8C263 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms