Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Mir770-201ENSMUST00000103252 94 ntBASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf3Q8C120 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Gm6345-202ENSMUST00000180900 204 ntBASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf3Q8C120 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh3rf3Q8C120 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Sh3rf3Q8C120 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms