Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Gm6623-201ENSMUST00000173570 544 ntBASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Gm6345-202ENSMUST00000180900 204 ntBASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trub1Q8C0D0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.77■□□□□ 0.27
Trub1Q8C0D0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trub1Q8C0D0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trub1Q8C0D0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trub1Q8C0D0 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.77■□□□□ 0.27
Trub1Q8C0D0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trub1Q8C0D0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trub1Q8C0D0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.77■□□□□ 0.27
Trub1Q8C0D0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trub1Q8C0D0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trub1Q8C0D0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trub1Q8C0D0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trub1Q8C0D0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Gm13836-201ENSMUST00000121159 501 ntBASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Gm10052-201ENSMUST00000168019 960 ntBASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Gm44430-201ENSMUST00000203376 995 ntBASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Gm7729-201ENSMUST00000050143 801 ntBASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trub1Q8C0D0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trub1Q8C0D0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trub1Q8C0D0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trub1Q8C0D0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trub1Q8C0D0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trub1Q8C0D0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trub1Q8C0D0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.74■□□□□ 0.27
Trub1Q8C0D0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trub1Q8C0D0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trub1Q8C0D0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms