Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf2Q8BZT2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Mir5131-201ENSMUST00000175426 93 ntBASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Sh3rf2Q8BZT2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Gm10060-201ENSMUST00000212002 111 ntBASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sh3rf2Q8BZT2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf2Q8BZT2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms