Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptpn7Q8BUM3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptpn7Q8BUM3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Gm13186-201ENSMUST00000118031 316 ntBASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Phf7-203ENSMUST00000226565 1971 ntBASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ptpn7Q8BUM3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ptpn7Q8BUM3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Ptpn7Q8BUM3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ptpn7Q8BUM3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ptpn7Q8BUM3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ptpn7Q8BUM3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Gm5417-201ENSMUST00000079706 384 ntBASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ptpn7Q8BUM3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptpn7Q8BUM3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms