Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rab11fip4Q8BQP8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rab11fip4Q8BQP8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Gm45328-201ENSMUST00000210942 917 ntBASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rab11fip4Q8BQP8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Mir3081-201ENSMUST00000175305 84 ntBASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rab11fip4Q8BQP8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Gm27742-201ENSMUST00000184667 60 ntBASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip4Q8BQP8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip4Q8BQP8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip4Q8BQP8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms