Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sfr1Q8BP27 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.52■□□□□ 0.24
Sfr1Q8BP27 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sfr1Q8BP27 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sfr1Q8BP27 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sfr1Q8BP27 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sfr1Q8BP27 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sfr1Q8BP27 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sfr1Q8BP27 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sfr1Q8BP27 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sfr1Q8BP27 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sfr1Q8BP27 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sfr1Q8BP27 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sfr1Q8BP27 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Sfr1Q8BP27 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sfr1Q8BP27 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sfr1Q8BP27 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Gm7284-201ENSMUST00000131667 944 ntBASIC16.51■□□□□ 0.23
Sfr1Q8BP27 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sfr1Q8BP27 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Sfr1Q8BP27 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Gm10052-201ENSMUST00000168019 960 ntBASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Gm21362-201ENSMUST00000194272 928 ntBASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Gm7729-201ENSMUST00000050143 801 ntBASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Gm7367-201ENSMUST00000057611 492 ntBASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sfr1Q8BP27 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms