Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Dio3-201ENSMUST00000097228 1449 ntBASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn3bQ8BHK2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn3bQ8BHK2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.02
Scn3bQ8BHK2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Gm13158-201ENSMUST00000122007 736 ntBASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn3bQ8BHK2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Sybu-209ENSMUST00000228639 4113 ntBASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn3bQ8BHK2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms