Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm27704-201ENSMUST00000185094 107 ntBASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Gm29518-201ENSMUST00000190858 372 ntBASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Gm18115-201ENSMUST00000221209 621 ntBASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Depdc1bQ8BH88 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Gm27741-201ENSMUST00000185060 237 ntBASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Gm17808-201ENSMUST00000200859 894 ntBASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Depdc1bQ8BH88 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Depdc1bQ8BH88 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.64■□□□□ 0.42
Depdc1bQ8BH88 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Depdc1bQ8BH88 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Depdc1bQ8BH88 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms