Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc5a7Q8BGY9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc5a7Q8BGY9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc5a7Q8BGY9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc5a7Q8BGY9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc5a7Q8BGY9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.29□□□□□ -0.12
Slc5a7Q8BGY9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc5a7Q8BGY9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc5a7Q8BGY9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc5a7Q8BGY9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc5a7Q8BGY9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Gm18025-201ENSMUST00000221733 862 ntBASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc5a7Q8BGY9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc5a7Q8BGY9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Gm2559-201ENSMUST00000201323 363 ntBASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Gm42545-201ENSMUST00000202755 922 ntBASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc5a7Q8BGY9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc5a7Q8BGY9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc5a7Q8BGY9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms