Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smndc1Q8BGT7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Gm10138-203ENSMUST00000206952 366 ntBASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smndc1Q8BGT7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Mir1199-201ENSMUST00000117015 119 ntBASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Gm38285-201ENSMUST00000192928 922 ntBASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smndc1Q8BGT7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Asic1-205ENSMUST00000228185 1818 ntBASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smndc1Q8BGT7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smndc1Q8BGT7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 124 ms