Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim6Q8BGE7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Prob1-201ENSMUST00000097619 3021 ntBASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim6Q8BGE7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim6Q8BGE7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Trim6Q8BGE7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim6Q8BGE7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim6Q8BGE7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim6Q8BGE7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim6Q8BGE7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms