Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.85■□□□□ 0.13
Trim50Q810I2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trim50Q810I2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.85■□□□□ 0.13
Trim50Q810I2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
Trim50Q810I2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim50Q810I2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim50Q810I2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim50Q810I2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim50Q810I2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim50Q810I2 Gm6345-202ENSMUST00000180900 204 ntBASIC15.84■□□□□ 0.13
Trim50Q810I2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim50Q810I2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim50Q810I2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim50Q810I2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim50Q810I2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim50Q810I2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim50Q810I2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim50Q810I2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim50Q810I2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim50Q810I2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.83■□□□□ 0.13
Trim50Q810I2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim50Q810I2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim50Q810I2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim50Q810I2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim50Q810I2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim50Q810I2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim50Q810I2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim50Q810I2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
Trim50Q810I2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim50Q810I2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.83■□□□□ 0.12
Trim50Q810I2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim50Q810I2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.83■□□□□ 0.12
Trim50Q810I2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim50Q810I2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim50Q810I2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim50Q810I2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim50Q810I2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trim50Q810I2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim50Q810I2 AA414768-201ENSMUST00000121924 1257 ntBASIC15.82■□□□□ 0.12
Trim50Q810I2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim50Q810I2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim50Q810I2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim50Q810I2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim50Q810I2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim50Q810I2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.82■□□□□ 0.12
Trim50Q810I2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Trim50Q810I2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim50Q810I2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.81■□□□□ 0.12
Trim50Q810I2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Gm25016-201ENSMUST00000158399 131 ntBASIC15.81■□□□□ 0.12
Trim50Q810I2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 Gm36967-201ENSMUST00000193814 266 ntBASIC15.81■□□□□ 0.12
Trim50Q810I2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim50Q810I2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim50Q810I2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms