Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Gm15358-201ENSMUST00000119249 520 ntBASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trnp1Q80ZI1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Gm7787-201ENSMUST00000216858 688 ntBASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trnp1Q80ZI1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Gm13597-201ENSMUST00000121239 375 ntBASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnp1Q80ZI1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Gm5312-201ENSMUST00000203728 547 ntBASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnp1Q80ZI1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms