Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Mir8112-201ENSMUST00000184382 131 ntBASIC16.94■□□□□ 0.3
Prdm4Q80V63 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.94■□□□□ 0.3
Prdm4Q80V63 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.94■□□□□ 0.3
Prdm4Q80V63 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.94■□□□□ 0.3
Prdm4Q80V63 Gm18025-201ENSMUST00000221733 862 ntBASIC16.94■□□□□ 0.3
Prdm4Q80V63 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prdm4Q80V63 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Gm15378-201ENSMUST00000121894 207 ntBASIC16.93■□□□□ 0.3
Prdm4Q80V63 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Phf7-203ENSMUST00000226565 1971 ntBASIC16.93■□□□□ 0.3
Prdm4Q80V63 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prdm4Q80V63 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.92■□□□□ 0.3
Prdm4Q80V63 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.92■□□□□ 0.3
Prdm4Q80V63 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.91■□□□□ 0.3
Prdm4Q80V63 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prdm4Q80V63 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.91■□□□□ 0.3
Prdm4Q80V63 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prdm4Q80V63 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms