Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh19Q80TF3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh19Q80TF3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Gm36967-201ENSMUST00000193814 266 ntBASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdh19Q80TF3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh19Q80TF3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Gm13884-201ENSMUST00000118103 829 ntBASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdh19Q80TF3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms