Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf38bQ80SY5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf38bQ80SY5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf38bQ80SY5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Gm27397-201ENSMUST00000184997 107 ntBASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Gm44487-201ENSMUST00000205145 325 ntBASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38bQ80SY5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.94■□□□□ 0.3
Prpf38bQ80SY5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Gm6296-201ENSMUST00000222599 943 ntBASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf38bQ80SY5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Mir5126-201ENSMUST00000175513 77 ntBASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf38bQ80SY5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms