Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.96□□□□□ -0.01
Pif1Q80SX8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.96□□□□□ -0.01
Pif1Q80SX8 Gm10060-201ENSMUST00000212002 111 ntBASIC14.96□□□□□ -0.01
Pif1Q80SX8 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.96□□□□□ -0.01
Pif1Q80SX8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pif1Q80SX8 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.96□□□□□ -0.02
Pif1Q80SX8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pif1Q80SX8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pif1Q80SX8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pif1Q80SX8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pif1Q80SX8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Pif1Q80SX8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Gm37935-201ENSMUST00000192012 982 ntBASIC14.95□□□□□ -0.02
Pif1Q80SX8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.95□□□□□ -0.02
Pif1Q80SX8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pif1Q80SX8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.95□□□□□ -0.02
Pif1Q80SX8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pif1Q80SX8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.94□□□□□ -0.02
Pif1Q80SX8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Gm25745-201ENSMUST00000174945 133 ntBASIC14.94□□□□□ -0.02
Pif1Q80SX8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Pif1Q80SX8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pif1Q80SX8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.93□□□□□ -0.02
Pif1Q80SX8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.93□□□□□ -0.02
Pif1Q80SX8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pif1Q80SX8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms