Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sh3d21Q7TSG5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Mir770-201ENSMUST00000103252 94 ntBASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Gm23634-201ENSMUST00000175071 91 ntBASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3d21Q7TSG5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3d21Q7TSG5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Gm6623-201ENSMUST00000173570 544 ntBASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3d21Q7TSG5 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 AA414768-201ENSMUST00000121924 1257 ntBASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Gm5587-201ENSMUST00000206270 674 ntBASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.77■□□□□ 0.44
Sh3d21Q7TSG5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sh3d21Q7TSG5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Sh3d21Q7TSG5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d21Q7TSG5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d21Q7TSG5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d21Q7TSG5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d21Q7TSG5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.76■□□□□ 0.43
Sh3d21Q7TSG5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d21Q7TSG5 Gm6659-201ENSMUST00000174752 547 ntBASIC17.76■□□□□ 0.43
Sh3d21Q7TSG5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3d21Q7TSG5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms