Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.69□□□□□ -0.22
Smim12Q78RX3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Gm715-201ENSMUST00000117865 831 ntBASIC13.68□□□□□ -0.22
Smim12Q78RX3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.68□□□□□ -0.22
Smim12Q78RX3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.68□□□□□ -0.22
Smim12Q78RX3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim12Q78RX3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.67□□□□□ -0.22
Smim12Q78RX3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Gm18421-201ENSMUST00000204122 625 ntBASIC13.67□□□□□ -0.22
Smim12Q78RX3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Smim12Q78RX3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.67□□□□□ -0.22
Smim12Q78RX3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smim12Q78RX3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim12Q78RX3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Gm13168-201ENSMUST00000121771 632 ntBASIC13.66□□□□□ -0.22
Smim12Q78RX3 Gm13474-201ENSMUST00000122466 815 ntBASIC13.66□□□□□ -0.22
Smim12Q78RX3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Gm29707-201ENSMUST00000196325 491 ntBASIC13.66□□□□□ -0.22
Smim12Q78RX3 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.66□□□□□ -0.22
Smim12Q78RX3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.66□□□□□ -0.22
Smim12Q78RX3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim12Q78RX3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.66□□□□□ -0.22
Smim12Q78RX3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smim12Q78RX3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms