Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Thap2-203ENSMUST00000218989 527 ntBASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Gm13365-201ENSMUST00000121188 973 ntBASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Gm25948-201ENSMUST00000175334 112 ntBASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Gm43474-201ENSMUST00000196415 774 ntBASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn10aQ6QIY3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Gm20949-201ENSMUST00000206478 952 ntBASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Scn10aQ6QIY3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 Gm27301-201ENSMUST00000184012 127 ntBASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 Mir7023-201ENSMUST00000185093 64 ntBASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn10aQ6QIY3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scn10aQ6QIY3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Scn10aQ6QIY3 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.27■□□□□ 0.51
Scn10aQ6QIY3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Gm18246-201ENSMUST00000221023 728 ntBASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Gm19164-201ENSMUST00000210667 640 ntBASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Gm5186-201ENSMUST00000218781 920 ntBASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn10aQ6QIY3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms