Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Gm7488-201ENSMUST00000117148 684 ntBASIC13.65□□□□□ -0.22
Rif1Q6PR54 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Gm27646-201ENSMUST00000183989 110 ntBASIC13.65□□□□□ -0.22
Rif1Q6PR54 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.65□□□□□ -0.22
Rif1Q6PR54 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rif1Q6PR54 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.65□□□□□ -0.22
Rif1Q6PR54 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rif1Q6PR54 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rif1Q6PR54 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rif1Q6PR54 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rif1Q6PR54 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Gm12151-201ENSMUST00000121374 290 ntBASIC13.64□□□□□ -0.23
Rif1Q6PR54 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.64□□□□□ -0.23
Rif1Q6PR54 Gm6266-201ENSMUST00000203844 806 ntBASIC13.64□□□□□ -0.23
Rif1Q6PR54 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.64□□□□□ -0.23
Rif1Q6PR54 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.64□□□□□ -0.23
Rif1Q6PR54 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rif1Q6PR54 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Gm8602-201ENSMUST00000184045 607 ntBASIC13.63□□□□□ -0.23
Rif1Q6PR54 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rif1Q6PR54 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Gm4459-201ENSMUST00000118750 468 ntBASIC13.63□□□□□ -0.23
Rif1Q6PR54 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Gm18827-201ENSMUST00000188341 790 ntBASIC13.63□□□□□ -0.23
Rif1Q6PR54 Gm44855-201ENSMUST00000205725 362 ntBASIC13.63□□□□□ -0.23
Rif1Q6PR54 Gm45331-201ENSMUST00000209868 554 ntBASIC13.63□□□□□ -0.23
Rif1Q6PR54 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rif1Q6PR54 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rif1Q6PR54 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rif1Q6PR54 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rif1Q6PR54 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms