Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm17968-201ENSMUST00000194902 784 ntBASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Chchd1-203ENSMUST00000224633 557 ntBASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd4Q6PDQ2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd4Q6PDQ2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC21.08■□□□□ 0.97
Chd4Q6PDQ2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd4Q6PDQ2 Gm45167-201ENSMUST00000208007 322 ntBASIC21.08■□□□□ 0.97
Chd4Q6PDQ2 AC124549.3-201ENSMUST00000225541 367 ntBASIC21.08■□□□□ 0.97
Chd4Q6PDQ2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd4Q6PDQ2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd4Q6PDQ2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC21.08■□□□□ 0.97
Chd4Q6PDQ2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd4Q6PDQ2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd4Q6PDQ2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd4Q6PDQ2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC21.08■□□□□ 0.96
Chd4Q6PDQ2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Chd4Q6PDQ2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd4Q6PDQ2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd4Q6PDQ2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
Chd4Q6PDQ2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC21.08■□□□□ 0.96
Chd4Q6PDQ2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC21.08■□□□□ 0.96
Chd4Q6PDQ2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Chd4Q6PDQ2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Gm27397-201ENSMUST00000184997 107 ntBASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 AC158538.2-201ENSMUST00000225455 906 ntBASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd4Q6PDQ2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Gm4899-201ENSMUST00000178708 719 ntBASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 AC174742.1-201ENSMUST00000218272 304 ntBASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chd4Q6PDQ2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd4Q6PDQ2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC21.04■□□□□ 0.96
Chd4Q6PDQ2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms