Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShbQ6PD21 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShbQ6PD21 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShbQ6PD21 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ShbQ6PD21 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShbQ6PD21 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ShbQ6PD21 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.5■□□□□ 0.39
ShbQ6PD21 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.5■□□□□ 0.39
ShbQ6PD21 Mir6977-201ENSMUST00000184960 64 ntBASIC17.5■□□□□ 0.39
ShbQ6PD21 Gm8969-201ENSMUST00000199694 526 ntBASIC17.5■□□□□ 0.39
ShbQ6PD21 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.5■□□□□ 0.39
ShbQ6PD21 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.5■□□□□ 0.39
ShbQ6PD21 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.5■□□□□ 0.39
ShbQ6PD21 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShbQ6PD21 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShbQ6PD21 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShbQ6PD21 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ShbQ6PD21 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShbQ6PD21 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ShbQ6PD21 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.49■□□□□ 0.39
ShbQ6PD21 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.49■□□□□ 0.39
ShbQ6PD21 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.49■□□□□ 0.39
ShbQ6PD21 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ShbQ6PD21 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShbQ6PD21 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShbQ6PD21 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShbQ6PD21 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ShbQ6PD21 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShbQ6PD21 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShbQ6PD21 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShbQ6PD21 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.48■□□□□ 0.39
ShbQ6PD21 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.48■□□□□ 0.39
ShbQ6PD21 Gm27437-201ENSMUST00000183429 107 ntBASIC17.48■□□□□ 0.39
ShbQ6PD21 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ShbQ6PD21 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShbQ6PD21 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShbQ6PD21 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.48■□□□□ 0.39
ShbQ6PD21 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ShbQ6PD21 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShbQ6PD21 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ShbQ6PD21 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ShbQ6PD21 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
ShbQ6PD21 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ShbQ6PD21 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.47■□□□□ 0.39
ShbQ6PD21 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ShbQ6PD21 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.47■□□□□ 0.39
ShbQ6PD21 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ShbQ6PD21 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ShbQ6PD21 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ShbQ6PD21 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShbQ6PD21 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShbQ6PD21 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShbQ6PD21 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShbQ6PD21 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.46■□□□□ 0.39
ShbQ6PD21 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ShbQ6PD21 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShbQ6PD21 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.46■□□□□ 0.39
ShbQ6PD21 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ShbQ6PD21 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.46■□□□□ 0.39
ShbQ6PD21 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms