Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Gm27000-201ENSMUST00000182943 842 ntBASIC18.23■□□□□ 0.51
Abcf1Q6P542 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Abcf1Q6P542 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcf1Q6P542 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.22■□□□□ 0.51
Abcf1Q6P542 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Abcf1Q6P542 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Gm2274-201ENSMUST00000184539 609 ntBASIC18.21■□□□□ 0.51
Abcf1Q6P542 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.21■□□□□ 0.51
Abcf1Q6P542 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.21■□□□□ 0.51
Abcf1Q6P542 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcf1Q6P542 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Abcf1Q6P542 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.2■□□□□ 0.5
Abcf1Q6P542 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Gm7889-201ENSMUST00000185591 958 ntBASIC18.2■□□□□ 0.5
Abcf1Q6P542 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.2■□□□□ 0.5
Abcf1Q6P542 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Abcf1Q6P542 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcf1Q6P542 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.19■□□□□ 0.5
Abcf1Q6P542 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.19■□□□□ 0.5
Abcf1Q6P542 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.19■□□□□ 0.5
Abcf1Q6P542 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcf1Q6P542 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.18■□□□□ 0.5
Abcf1Q6P542 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms