Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Gm18032-201ENSMUST00000222541 538 ntBASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Gm9987-201ENSMUST00000069768 567 ntBASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp140Q6NSQ5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Gm18101-201ENSMUST00000215769 548 ntBASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp140Q6NSQ5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sp140Q6NSQ5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms