Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Gm37444-201ENSMUST00000193605 439 ntBASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga7Q6DD96 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Gm2274-201ENSMUST00000184539 609 ntBASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Gm37055-201ENSMUST00000191866 133 ntBASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhga7Q6DD96 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga7Q6DD96 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Gm13436-201ENSMUST00000120418 567 ntBASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Gm16061-201ENSMUST00000122167 857 ntBASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Gm10566-201ENSMUST00000086739 996 ntBASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdhga7Q6DD96 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga7Q6DD96 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms