Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm18246-201ENSMUST00000221023 728 ntBASIC19.58■□□□□ 0.72
Col11a2Q64739 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.58■□□□□ 0.72
Col11a2Q64739 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col11a2Q64739 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col11a2Q64739 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col11a2Q64739 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col11a2Q64739 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Col11a2Q64739 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col11a2Q64739 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.58■□□□□ 0.72
Col11a2Q64739 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Col11a2Q64739 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Col11a2Q64739 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a2Q64739 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a2Q64739 Rprl2-201ENSMUST00000157150 290 ntBASIC19.57■□□□□ 0.72
Col11a2Q64739 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.57■□□□□ 0.72
Col11a2Q64739 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a2Q64739 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a2Q64739 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.57■□□□□ 0.72
Col11a2Q64739 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.57■□□□□ 0.72
Col11a2Q64739 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a2Q64739 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a2Q64739 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a2Q64739 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a2Q64739 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col11a2Q64739 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.56■□□□□ 0.72
Col11a2Q64739 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.56■□□□□ 0.72
Col11a2Q64739 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.56■□□□□ 0.72
Col11a2Q64739 Gm27301-201ENSMUST00000184012 127 ntBASIC19.56■□□□□ 0.72
Col11a2Q64739 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.56■□□□□ 0.72
Col11a2Q64739 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col11a2Q64739 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Col11a2Q64739 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.56■□□□□ 0.72
Col11a2Q64739 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.56■□□□□ 0.72
Col11a2Q64739 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.56■□□□□ 0.72
Col11a2Q64739 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.56■□□□□ 0.72
Col11a2Q64739 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col11a2Q64739 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col11a2Q64739 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a2Q64739 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a2Q64739 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Col11a2Q64739 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a2Q64739 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a2Q64739 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a2Q64739 Rpph1-201ENSMUST00000175096 319 ntBASIC19.55■□□□□ 0.72
Col11a2Q64739 Gm20553-201ENSMUST00000204205 844 ntBASIC19.55■□□□□ 0.72
Col11a2Q64739 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.55■□□□□ 0.72
Col11a2Q64739 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.55■□□□□ 0.72
Col11a2Q64739 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.55■□□□□ 0.72
Col11a2Q64739 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Col11a2Q64739 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a2Q64739 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a2Q64739 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col11a2Q64739 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.55■□□□□ 0.72
Col11a2Q64739 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.54■□□□□ 0.72
Col11a2Q64739 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Col11a2Q64739 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.54■□□□□ 0.72
Col11a2Q64739 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.54■□□□□ 0.72
Col11a2Q64739 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Col11a2Q64739 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Col11a2Q64739 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Gm18889-201ENSMUST00000174284 929 ntBASIC19.54■□□□□ 0.72
Col11a2Q64739 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col11a2Q64739 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Col11a2Q64739 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a2Q64739 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.53■□□□□ 0.72
Col11a2Q64739 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a2Q64739 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a2Q64739 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a2Q64739 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a2Q64739 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a2Q64739 Gm6257-201ENSMUST00000163864 910 ntBASIC19.53■□□□□ 0.72
Col11a2Q64739 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Col11a2Q64739 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a2Q64739 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a2Q64739 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col11a2Q64739 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms