Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Scn9aQ62205 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Scn9aQ62205 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 Mir7023-201ENSMUST00000185093 64 ntBASIC19.02■□□□□ 0.64
Scn9aQ62205 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Scn9aQ62205 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Scn9aQ62205 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Scn9aQ62205 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
Scn9aQ62205 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Scn9aQ62205 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn9aQ62205 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.01■□□□□ 0.63
Scn9aQ62205 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn9aQ62205 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn9aQ62205 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm45747-201ENSMUST00000212203 999 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn9aQ62205 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn9aQ62205 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn9aQ62205 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Scn9aQ62205 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn9aQ62205 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn9aQ62205 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn9aQ62205 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Scn9aQ62205 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm4518-201ENSMUST00000182638 718 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.01■□□□□ 0.63
Scn9aQ62205 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.01■□□□□ 0.63
Scn9aQ62205 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19■□□□□ 0.63
Scn9aQ62205 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Gm8344-201ENSMUST00000119813 856 ntBASIC19■□□□□ 0.63
Scn9aQ62205 Gm5177-201ENSMUST00000183092 997 ntBASIC19■□□□□ 0.63
Scn9aQ62205 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19■□□□□ 0.63
Scn9aQ62205 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19■□□□□ 0.63
Scn9aQ62205 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn9aQ62205 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn9aQ62205 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Scn9aQ62205 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn9aQ62205 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn9aQ62205 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Scn9aQ62205 Gm43125-201ENSMUST00000201724 730 ntBASIC18.99■□□□□ 0.63
Scn9aQ62205 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn9aQ62205 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.99■□□□□ 0.63
Scn9aQ62205 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Scn9aQ62205 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn9aQ62205 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn9aQ62205 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.99■□□□□ 0.63
Scn9aQ62205 Gm9682-201ENSMUST00000197505 556 ntBASIC18.99■□□□□ 0.63
Scn9aQ62205 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.99■□□□□ 0.63
Scn9aQ62205 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn9aQ62205 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn9aQ62205 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn9aQ62205 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.98■□□□□ 0.63
Scn9aQ62205 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn9aQ62205 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn9aQ62205 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn9aQ62205 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn9aQ62205 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.98■□□□□ 0.63
Scn9aQ62205 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn9aQ62205 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.98■□□□□ 0.63
Scn9aQ62205 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Scn9aQ62205 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms