Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Notch3Q61982 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Notch3Q61982 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.48□□□□□ -0.41
Notch3Q61982 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Notch3Q61982 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Notch3Q61982 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Notch3Q61982 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Notch3Q61982 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Notch3Q61982 Mir5126-201ENSMUST00000175513 77 ntBASIC12.48□□□□□ -0.41
Notch3Q61982 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Notch3Q61982 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Notch3Q61982 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.47□□□□□ -0.41
Notch3Q61982 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Notch3Q61982 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.47□□□□□ -0.41
Notch3Q61982 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.47□□□□□ -0.41
Notch3Q61982 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Notch3Q61982 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.46□□□□□ -0.41
Notch3Q61982 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.46□□□□□ -0.41
Notch3Q61982 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Notch3Q61982 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Notch3Q61982 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.46□□□□□ -0.41
Notch3Q61982 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Notch3Q61982 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.46□□□□□ -0.41
Notch3Q61982 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Notch3Q61982 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.46□□□□□ -0.42
Notch3Q61982 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Notch3Q61982 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Notch3Q61982 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Notch3Q61982 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Notch3Q61982 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.46□□□□□ -0.42
Notch3Q61982 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Notch3Q61982 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Notch3Q61982 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Notch3Q61982 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Notch3Q61982 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Notch3Q61982 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.45□□□□□ -0.42
Notch3Q61982 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.45□□□□□ -0.42
Notch3Q61982 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Notch3Q61982 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Gm27867-201ENSMUST00000184778 125 ntBASIC12.45□□□□□ -0.42
Notch3Q61982 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.45□□□□□ -0.42
Notch3Q61982 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.45□□□□□ -0.42
Notch3Q61982 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Notch3Q61982 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Notch3Q61982 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Notch3Q61982 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms