Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ecm1Q61508 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.94■□□□□ 0.46
Ecm1Q61508 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ecm1Q61508 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.94■□□□□ 0.46
Ecm1Q61508 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.94■□□□□ 0.46
Ecm1Q61508 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Ecm1Q61508 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ecm1Q61508 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ecm1Q61508 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ecm1Q61508 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.93■□□□□ 0.46
Ecm1Q61508 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ecm1Q61508 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ecm1Q61508 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ecm1Q61508 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ecm1Q61508 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.92■□□□□ 0.46
Ecm1Q61508 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.92■□□□□ 0.46
Ecm1Q61508 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ecm1Q61508 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ecm1Q61508 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Ecm1Q61508 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.91■□□□□ 0.46
Ecm1Q61508 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.91■□□□□ 0.46
Ecm1Q61508 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.91■□□□□ 0.46
Ecm1Q61508 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Ecm1Q61508 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.91■□□□□ 0.46
Ecm1Q61508 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ecm1Q61508 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.91■□□□□ 0.46
Ecm1Q61508 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.91■□□□□ 0.46
Ecm1Q61508 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ecm1Q61508 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ecm1Q61508 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ecm1Q61508 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ecm1Q61508 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ecm1Q61508 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ecm1Q61508 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ecm1Q61508 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Ecm1Q61508 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ecm1Q61508 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ecm1Q61508 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ecm1Q61508 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.9■□□□□ 0.46
Ecm1Q61508 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.9■□□□□ 0.46
Ecm1Q61508 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.9■□□□□ 0.46
Ecm1Q61508 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Ecm1Q61508 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms