Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cln3Q61124 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cln3Q61124 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cln3Q61124 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.76■□□□□ 0.43
Cln3Q61124 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cln3Q61124 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.76■□□□□ 0.43
Cln3Q61124 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cln3Q61124 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.76■□□□□ 0.43
Cln3Q61124 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cln3Q61124 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cln3Q61124 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cln3Q61124 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.76■□□□□ 0.43
Cln3Q61124 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.75■□□□□ 0.43
Cln3Q61124 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Cln3Q61124 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.75■□□□□ 0.43
Cln3Q61124 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.75■□□□□ 0.43
Cln3Q61124 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.75■□□□□ 0.43
Cln3Q61124 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cln3Q61124 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.75■□□□□ 0.43
Cln3Q61124 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.75■□□□□ 0.43
Cln3Q61124 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cln3Q61124 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cln3Q61124 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Cln3Q61124 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cln3Q61124 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.74■□□□□ 0.43
Cln3Q61124 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.74■□□□□ 0.43
Cln3Q61124 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.74■□□□□ 0.43
Cln3Q61124 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.74■□□□□ 0.43
Cln3Q61124 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.74■□□□□ 0.43
Cln3Q61124 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.74■□□□□ 0.43
Cln3Q61124 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cln3Q61124 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.74■□□□□ 0.43
Cln3Q61124 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cln3Q61124 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.73■□□□□ 0.43
Cln3Q61124 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cln3Q61124 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cln3Q61124 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cln3Q61124 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.73■□□□□ 0.43
Cln3Q61124 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cln3Q61124 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.73■□□□□ 0.43
Cln3Q61124 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.73■□□□□ 0.43
Cln3Q61124 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cln3Q61124 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.73■□□□□ 0.43
Cln3Q61124 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.73■□□□□ 0.43
Cln3Q61124 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.73■□□□□ 0.43
Cln3Q61124 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cln3Q61124 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cln3Q61124 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cln3Q61124 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cln3Q61124 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.73■□□□□ 0.43
Cln3Q61124 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cln3Q61124 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Gm11764-201ENSMUST00000120221 623 ntBASIC17.72■□□□□ 0.43
Cln3Q61124 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cln3Q61124 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.72■□□□□ 0.43
Cln3Q61124 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Cln3Q61124 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cln3Q61124 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cln3Q61124 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cln3Q61124 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms