Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Col12a1Q60847 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col12a1Q60847 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col12a1Q60847 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col12a1Q60847 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col12a1Q60847 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.96■□□□□ 0.15
Col12a1Q60847 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col12a1Q60847 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col12a1Q60847 Gm6912-201ENSMUST00000117218 544 ntBASIC15.96■□□□□ 0.15
Col12a1Q60847 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col12a1Q60847 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.96■□□□□ 0.15
Col12a1Q60847 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col12a1Q60847 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col12a1Q60847 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
Col12a1Q60847 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col12a1Q60847 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col12a1Q60847 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Col12a1Q60847 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Col12a1Q60847 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col12a1Q60847 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col12a1Q60847 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col12a1Q60847 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col12a1Q60847 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col12a1Q60847 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col12a1Q60847 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Col12a1Q60847 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col12a1Q60847 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.95■□□□□ 0.14
Col12a1Q60847 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col12a1Q60847 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col12a1Q60847 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.95■□□□□ 0.14
Col12a1Q60847 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Col12a1Q60847 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Col12a1Q60847 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Col12a1Q60847 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.95■□□□□ 0.14
Col12a1Q60847 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col12a1Q60847 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Gm37153-201ENSMUST00000193637 231 ntBASIC15.94■□□□□ 0.14
Col12a1Q60847 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.94■□□□□ 0.14
Col12a1Q60847 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.94■□□□□ 0.14
Col12a1Q60847 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Col12a1Q60847 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.94■□□□□ 0.14
Col12a1Q60847 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col12a1Q60847 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col12a1Q60847 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col12a1Q60847 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col12a1Q60847 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col12a1Q60847 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col12a1Q60847 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.93■□□□□ 0.14
Col12a1Q60847 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col12a1Q60847 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.93■□□□□ 0.14
Col12a1Q60847 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.93■□□□□ 0.14
Col12a1Q60847 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col12a1Q60847 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col12a1Q60847 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col12a1Q60847 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms