Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Scaf1Q5U4C3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scaf1Q5U4C3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Scaf1Q5U4C3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scaf1Q5U4C3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scaf1Q5U4C3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Scaf1Q5U4C3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC21.14■□□□□ 0.97
Scaf1Q5U4C3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scaf1Q5U4C3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Gm6736-201ENSMUST00000166583 948 ntBASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scaf1Q5U4C3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Gm12260-201ENSMUST00000122447 411 ntBASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Gm18489-201ENSMUST00000172565 551 ntBASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Gm5253-201ENSMUST00000187104 1025 ntBASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Gm19164-201ENSMUST00000210667 640 ntBASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Scaf1Q5U4C3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
Scaf1Q5U4C3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scaf1Q5U4C3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC21.09■□□□□ 0.97
Scaf1Q5U4C3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms