Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-4Q5R1I0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Gm34391-201ENSMUST00000203706 907 ntBASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Birc2-201ENSMUST00000054878 378 ntBASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-4Q5R1I0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Gm13216-201ENSMUST00000117145 591 ntBASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav6d-4Q5R1I0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Gm15165-201ENSMUST00000118140 502 ntBASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-4Q5R1I0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6d-4Q5R1I0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms