Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5d-4Q5R1F6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5d-4Q5R1F6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Gm27389-201ENSMUST00000183622 195 ntBASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5d-4Q5R1F6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Gm22697-201ENSMUST00000175194 63 ntBASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Gm29707-201ENSMUST00000196325 491 ntBASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5d-4Q5R1F6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms