Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Gm18671-201ENSMUST00000214826 683 ntBASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav3-3Q5R1C3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-3Q5R1C3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Gm7514-201ENSMUST00000209475 934 ntBASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav3-3Q5R1C3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-3Q5R1C3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms