Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Gm15173-201ENSMUST00000122049 433 ntBASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Gm2756-201ENSMUST00000195851 400 ntBASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Gm6089-201ENSMUST00000197666 938 ntBASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf43Q5NCP0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf43Q5NCP0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf43Q5NCP0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf43Q5NCP0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Gm6736-201ENSMUST00000166583 948 ntBASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf43Q5NCP0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Gm14140-201ENSMUST00000119999 995 ntBASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Gm6550-201ENSMUST00000187574 993 ntBASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Gm15590-201ENSMUST00000078419 552 ntBASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Haglr-201ENSMUST00000100000 2085 ntBASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf43Q5NCP0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Gm11780-201ENSMUST00000136880 516 ntBASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf43Q5NCP0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 Gm8097-201ENSMUST00000117903 829 ntBASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.48■□□□□ 0.23
Rnf43Q5NCP0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms