Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
Ckap2Q3V1H1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ckap2Q3V1H1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ckap2Q3V1H1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ckap2Q3V1H1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap2Q3V1H1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap2Q3V1H1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap2Q3V1H1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap2Q3V1H1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ckap2Q3V1H1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ckap2Q3V1H1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ckap2Q3V1H1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Ckap2Q3V1H1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Ckap2Q3V1H1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ckap2Q3V1H1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ckap2Q3V1H1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms