Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rapgef1Q3UHC1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rapgef1Q3UHC1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rapgef1Q3UHC1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rapgef1Q3UHC1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rapgef1Q3UHC1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rapgef1Q3UHC1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rapgef1Q3UHC1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rapgef1Q3UHC1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rapgef1Q3UHC1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rapgef1Q3UHC1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rapgef1Q3UHC1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Actl10-202ENSMUST00000226583 1501 ntBASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Gm11355-201ENSMUST00000121120 306 ntBASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rapgef1Q3UHC1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.77■□□□□ 0.44
Rapgef1Q3UHC1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rapgef1Q3UHC1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rapgef1Q3UHC1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rapgef1Q3UHC1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rapgef1Q3UHC1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rapgef1Q3UHC1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.77■□□□□ 0.44
Rapgef1Q3UHC1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rapgef1Q3UHC1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rapgef1Q3UHC1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rapgef1Q3UHC1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Rapgef1Q3UHC1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rapgef1Q3UHC1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rapgef1Q3UHC1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rapgef1Q3UHC1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rapgef1Q3UHC1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rapgef1Q3UHC1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Gm10566-201ENSMUST00000086739 996 ntBASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rapgef1Q3UHC1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rapgef1Q3UHC1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms