Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf180Q3U827 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf180Q3U827 Syt7-204ENSMUST00000223586 1344 ntBASIC19.04■□□□□ 0.64
Rnf180Q3U827 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf180Q3U827 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.04■□□□□ 0.64
Rnf180Q3U827 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.04■□□□□ 0.64
Rnf180Q3U827 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf180Q3U827 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC19.04■□□□□ 0.64
Rnf180Q3U827 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf180Q3U827 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf180Q3U827 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf180Q3U827 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf180Q3U827 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf180Q3U827 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.03■□□□□ 0.64
Rnf180Q3U827 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Gm8515-201ENSMUST00000194852 576 ntBASIC19.03■□□□□ 0.64
Rnf180Q3U827 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 AC132863.2-201ENSMUST00000226643 799 ntBASIC19.03■□□□□ 0.64
Rnf180Q3U827 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf180Q3U827 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf180Q3U827 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf180Q3U827 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.02■□□□□ 0.64
Rnf180Q3U827 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf180Q3U827 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rnf180Q3U827 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rnf180Q3U827 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.02■□□□□ 0.64
Rnf180Q3U827 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf180Q3U827 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rnf180Q3U827 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf180Q3U827 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf180Q3U827 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf180Q3U827 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf180Q3U827 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf180Q3U827 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.02■□□□□ 0.63
Rnf180Q3U827 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rnf180Q3U827 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Gm12859-201ENSMUST00000117834 427 ntBASIC19.01■□□□□ 0.63
Rnf180Q3U827 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.01■□□□□ 0.63
Rnf180Q3U827 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rnf180Q3U827 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Gm9385-201ENSMUST00000117563 472 ntBASIC19■□□□□ 0.63
Rnf180Q3U827 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC19■□□□□ 0.63
Rnf180Q3U827 AL593843.1-201ENSMUST00000195891 145 ntBASIC19■□□□□ 0.63
Rnf180Q3U827 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19■□□□□ 0.63
Rnf180Q3U827 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19■□□□□ 0.63
Rnf180Q3U827 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rnf180Q3U827 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19■□□□□ 0.63
Rnf180Q3U827 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf180Q3U827 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rnf180Q3U827 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf180Q3U827 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf180Q3U827 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf180Q3U827 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf180Q3U827 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf180Q3U827 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf180Q3U827 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rnf180Q3U827 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.99■□□□□ 0.63
Rnf180Q3U827 Gm8410-201ENSMUST00000117225 605 ntBASIC18.99■□□□□ 0.63
Rnf180Q3U827 Gm15487-201ENSMUST00000122373 465 ntBASIC18.99■□□□□ 0.63
Rnf180Q3U827 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms