Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3U1D9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3U1D9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Q3U1D9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3U1D9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3U1D9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3U1D9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3U1D9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Q3U1D9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Q3U1D9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Q3U1D9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.08□□□□□ -0.16
Q3U1D9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3U1D9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Q3U1D9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.08□□□□□ -0.16
Q3U1D9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.08□□□□□ -0.16
Q3U1D9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Q3U1D9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.08□□□□□ -0.16
Q3U1D9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3U1D9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Q3U1D9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Q3U1D9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Q3U1D9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.08□□□□□ -0.16
Q3U1D9 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.08□□□□□ -0.16
Q3U1D9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3U1D9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.08□□□□□ -0.16
Q3U1D9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3U1D9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3U1D9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3U1D9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3U1D9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Q3U1D9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Q3U1D9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Q3U1D9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.07□□□□□ -0.16
Q3U1D9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.07□□□□□ -0.16
Q3U1D9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.07□□□□□ -0.16
Q3U1D9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.07□□□□□ -0.16
Q3U1D9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Q3U1D9 Gm18733-201ENSMUST00000173950 856 ntBASIC14.07□□□□□ -0.16
Q3U1D9 Gm25745-201ENSMUST00000174945 133 ntBASIC14.07□□□□□ -0.16
Q3U1D9 Gm6376-201ENSMUST00000209407 580 ntBASIC14.07□□□□□ -0.16
Q3U1D9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.07□□□□□ -0.16
Q3U1D9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.07□□□□□ -0.16
Q3U1D9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.07□□□□□ -0.16
Q3U1D9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.07□□□□□ -0.16
Q3U1D9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Q3U1D9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Q3U1D9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Q3U1D9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Q3U1D9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Q3U1D9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Q3U1D9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Q3U1D9 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.07□□□□□ -0.16
Q3U1D9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.06□□□□□ -0.16
Q3U1D9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Q3U1D9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.06□□□□□ -0.16
Q3U1D9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Q3U1D9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Q3U1D9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q3U1D9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q3U1D9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms