Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Birc2-201ENSMUST00000054878 378 ntBASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.44■□□□□ 0.06
Khdc4Q3TCX3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Khdc4Q3TCX3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Gm28659-201ENSMUST00000188013 759 ntBASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Gm5864-201ENSMUST00000202263 970 ntBASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Khdc4Q3TCX3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Khdc4Q3TCX3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms