Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhej1Q3KNJ2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.33■□□□□ 0.37
Nhej1Q3KNJ2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.33■□□□□ 0.37
Nhej1Q3KNJ2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nhej1Q3KNJ2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Nhej1Q3KNJ2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nhej1Q3KNJ2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Nhej1Q3KNJ2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nhej1Q3KNJ2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nhej1Q3KNJ2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Nhej1Q3KNJ2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nhej1Q3KNJ2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nhej1Q3KNJ2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Mir5122-201ENSMUST00000175004 89 ntBASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhej1Q3KNJ2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhej1Q3KNJ2 Prob1-201ENSMUST00000097619 3021 ntBASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Gm29257-201ENSMUST00000186115 639 ntBASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Gm36967-201ENSMUST00000193814 266 ntBASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Gm18421-201ENSMUST00000204122 625 ntBASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms