Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf1Q07802 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf1Q07802 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ebf1Q07802 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.41■□□□□ 0.22
Ebf1Q07802 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ebf1Q07802 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Gm27867-201ENSMUST00000184778 125 ntBASIC16.41■□□□□ 0.22
Ebf1Q07802 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.41■□□□□ 0.22
Ebf1Q07802 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.41■□□□□ 0.22
Ebf1Q07802 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.41■□□□□ 0.22
Ebf1Q07802 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.41■□□□□ 0.22
Ebf1Q07802 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf1Q07802 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ebf1Q07802 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.4■□□□□ 0.22
Ebf1Q07802 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ebf1Q07802 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.4■□□□□ 0.22
Ebf1Q07802 Mir5131-201ENSMUST00000175426 93 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Ebf1Q07802 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm44357-201ENSMUST00000195897 142 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm19658-201ENSMUST00000196231 138 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm44367-201ENSMUST00000196836 138 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm44350-201ENSMUST00000197197 138 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm44390-201ENSMUST00000197533 144 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm44313-201ENSMUST00000198018 138 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm44486-201ENSMUST00000198508 138 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm44314-201ENSMUST00000199263 138 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm44394-201ENSMUST00000199558 138 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm44484-201ENSMUST00000199873 138 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm44466-201ENSMUST00000200264 138 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm44359-201ENSMUST00000200671 138 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Gm10060-201ENSMUST00000212002 111 ntBASIC16.4■□□□□ 0.22
Ebf1Q07802 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.4■□□□□ 0.22
Ebf1Q07802 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Ebf1Q07802 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ebf1Q07802 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ebf1Q07802 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ebf1Q07802 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf1Q07802 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Ebf1Q07802 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.39■□□□□ 0.22
Ebf1Q07802 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.39■□□□□ 0.21
Ebf1Q07802 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf1Q07802 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ebf1Q07802 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf1Q07802 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf1Q07802 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.39■□□□□ 0.21
Ebf1Q07802 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.39■□□□□ 0.21
Ebf1Q07802 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.39■□□□□ 0.21
Ebf1Q07802 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.39■□□□□ 0.21
Ebf1Q07802 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.39■□□□□ 0.21
Ebf1Q07802 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf1Q07802 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf1Q07802 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ebf1Q07802 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf1Q07802 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf1Q07802 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ebf1Q07802 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf1Q07802 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf1Q07802 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ebf1Q07802 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf1Q07802 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf1Q07802 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf1Q07802 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Ebf1Q07802 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ebf1Q07802 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf1Q07802 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Ebf1Q07802 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ebf1Q07802 Gm12350-201ENSMUST00000121208 462 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms