Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cdx4Q07424 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.57□□□□□ -0.4
Cdx4Q07424 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdx4Q07424 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cdx4Q07424 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.57□□□□□ -0.4
Cdx4Q07424 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdx4Q07424 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.56□□□□□ -0.4
Cdx4Q07424 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdx4Q07424 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdx4Q07424 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdx4Q07424 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cdx4Q07424 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.56□□□□□ -0.4
Cdx4Q07424 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Cdx4Q07424 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdx4Q07424 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.56□□□□□ -0.4
Cdx4Q07424 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx4Q07424 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdx4Q07424 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cdx4Q07424 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdx4Q07424 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdx4Q07424 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdx4Q07424 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdx4Q07424 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdx4Q07424 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Gm10819-201ENSMUST00000099988 561 ntBASIC12.55□□□□□ -0.4
Cdx4Q07424 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.55□□□□□ -0.4
Cdx4Q07424 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cdx4Q07424 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx4Q07424 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Cdx4Q07424 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdx4Q07424 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdx4Q07424 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdx4Q07424 Gm11355-201ENSMUST00000121120 306 ntBASIC12.54□□□□□ -0.4
Cdx4Q07424 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms