Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gfra1P97785 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gfra1P97785 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.42□□□□□ -0.26
Gfra1P97785 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gfra1P97785 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gfra1P97785 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Gfra1P97785 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gfra1P97785 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.42□□□□□ -0.26
Gfra1P97785 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Gfra1P97785 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Gfra1P97785 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gfra1P97785 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.41□□□□□ -0.26
Gfra1P97785 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.41□□□□□ -0.26
Gfra1P97785 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Gm13312-201ENSMUST00000119631 718 ntBASIC13.41□□□□□ -0.26
Gfra1P97785 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.41□□□□□ -0.26
Gfra1P97785 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.41□□□□□ -0.26
Gfra1P97785 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.41□□□□□ -0.26
Gfra1P97785 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.41□□□□□ -0.26
Gfra1P97785 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.41□□□□□ -0.26
Gfra1P97785 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Gfra1P97785 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Gfra1P97785 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Gfra1P97785 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gfra1P97785 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Gm15372-201ENSMUST00000120729 834 ntBASIC13.4□□□□□ -0.26
Gfra1P97785 Gm12895-201ENSMUST00000122214 226 ntBASIC13.4□□□□□ -0.26
Gfra1P97785 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Gfra1P97785 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.4□□□□□ -0.26
Gfra1P97785 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra1P97785 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Gfra1P97785 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Gfra1P97785 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.27
Gfra1P97785 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Gfra1P97785 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.39□□□□□ -0.27
Gfra1P97785 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Gfra1P97785 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Gfra1P97785 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Gfra1P97785 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.39□□□□□ -0.27
Gfra1P97785 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.39□□□□□ -0.27
Gfra1P97785 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Gfra1P97785 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Gfra1P97785 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra1P97785 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms