Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim43cP86449 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim43cP86449 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Trim43cP86449 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Trim43cP86449 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim43cP86449 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim43cP86449 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Gm10052-201ENSMUST00000168019 960 ntBASIC17.67■□□□□ 0.42
Trim43cP86449 Gm7977-201ENSMUST00000193787 748 ntBASIC17.67■□□□□ 0.42
Trim43cP86449 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Gm7729-201ENSMUST00000050143 801 ntBASIC17.67■□□□□ 0.42
Trim43cP86449 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim43cP86449 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.67■□□□□ 0.42
Trim43cP86449 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43cP86449 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim43cP86449 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim43cP86449 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Trim43cP86449 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim43cP86449 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim43cP86449 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim43cP86449 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim43cP86449 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim43cP86449 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim43cP86449 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim43cP86449 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim43cP86449 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.65■□□□□ 0.42
Trim43cP86449 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim43cP86449 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim43cP86449 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Trim43cP86449 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim43cP86449 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim43cP86449 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim43cP86449 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim43cP86449 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim43cP86449 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim43cP86449 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim43cP86449 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Trim43cP86449 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim43cP86449 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Trim43cP86449 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms