Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Six5P70178 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Six5P70178 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Six5P70178 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Six5P70178 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Six5P70178 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Six5P70178 Gm6345-202ENSMUST00000180900 204 ntBASIC15.21■□□□□ 0.03
Six5P70178 Gm29518-201ENSMUST00000190858 372 ntBASIC15.21■□□□□ 0.03
Six5P70178 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.21■□□□□ 0.03
Six5P70178 Gm17808-201ENSMUST00000200859 894 ntBASIC15.21■□□□□ 0.03
Six5P70178 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Six5P70178 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Six5P70178 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.21■□□□□ 0.03
Six5P70178 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Six5P70178 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Six5P70178 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Six5P70178 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Six5P70178 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Six5P70178 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Six5P70178 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Six5P70178 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Six5P70178 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Six5P70178 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Six5P70178 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Six5P70178 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.2■□□□□ 0.02
Six5P70178 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.2■□□□□ 0.02
Six5P70178 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Six5P70178 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Six5P70178 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Six5P70178 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Six5P70178 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Six5P70178 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Six5P70178 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Six5P70178 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.19■□□□□ 0.02
Six5P70178 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Six5P70178 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Six5P70178 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Six5P70178 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Six5P70178 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Six5P70178 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.18■□□□□ 0.02
Six5P70178 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Six5P70178 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.18■□□□□ 0.02
Six5P70178 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.18■□□□□ 0.02
Six5P70178 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Six5P70178 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms